Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 AC153872.1-201ENSMUST00000199539 128 ntBASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 AC166349.1-201ENSMUST00000220866 695 ntBASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Snrnp40Q6PE01 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Mir1982-201ENSMUST00000157368 74 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Mir7654-201ENSMUST00000185082 70 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 AC155252.1-201ENSMUST00000226462 1208 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Gm37166-201ENSMUST00000195473 2474 ntBASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Snrnp40Q6PE01 Hoxd12-201ENSMUST00000001878 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Gm5356-201ENSMUST00000093326 615 ntBASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC12.72□□□□□ -0.37
Snrnp40Q6PE01 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Snrnp40Q6PE01 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms