Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Herc4Q6PAV2 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm11745-201ENSMUST00000121669 448 ntBASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm18057-201ENSMUST00000208220 503 ntBASIC16.06■□□□□ 0.16
Herc4Q6PAV2 AC132104.2-201ENSMUST00000215011 266 ntBASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Herc4Q6PAV2 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Gm44645-201ENSMUST00000205492 1653 ntBASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Gm27494-201ENSMUST00000184735 189 ntBASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Herc4Q6PAV2 Gm5648-201ENSMUST00000122244 1587 ntBASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC16.04■□□□□ 0.16
Herc4Q6PAV2 Rprl2-201ENSMUST00000157150 290 ntBASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms