Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gm12428-201ENSMUST00000119844 727 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gm27920-201ENSMUST00000183953 96 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gm13233-201ENSMUST00000118760 1443 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gm13244-201ENSMUST00000118855 1446 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Hmgb4Q6P8W9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Hmgb4Q6P8W9 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Mir6977-201ENSMUST00000184960 64 ntBASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Hmgb4Q6P8W9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Gm42934-201ENSMUST00000196920 1345 ntBASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Hmgb4Q6P8W9 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms