Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.68□□□□□ -0.22
ParpbpQ6IRT3 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
ParpbpQ6IRT3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Carlr-201ENSMUST00000181515 2574 ntBASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gm5867-201ENSMUST00000063197 592 ntBASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ParpbpQ6IRT3 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.65□□□□□ -0.22
ParpbpQ6IRT3 Gm15427-201ENSMUST00000117288 531 ntBASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms