Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Scube3Q66PY1 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Gm10253-201ENSMUST00000194270 940 ntBASIC15.29■□□□□ 0.04
Scube3Q66PY1 Gm7774-201ENSMUST00000200064 533 ntBASIC15.29■□□□□ 0.04
Scube3Q66PY1 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Gm5779-201ENSMUST00000218467 910 ntBASIC15.29■□□□□ 0.04
Scube3Q66PY1 AC139382.1-201ENSMUST00000221402 498 ntBASIC15.29■□□□□ 0.04
Scube3Q66PY1 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Scube3Q66PY1 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Fgf17-202ENSMUST00000227123 1336 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm25948-201ENSMUST00000175334 112 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm9824-201ENSMUST00000178707 561 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm18049-201ENSMUST00000208909 581 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Ap5m1-205ENSMUST00000227431 3757 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm45605-201ENSMUST00000210265 4269 ntBASIC15.28■□□□□ 0.04
Scube3Q66PY1 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Scube3Q66PY1 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Gm37171-201ENSMUST00000192636 1185 ntBASIC15.27■□□□□ 0.04
Scube3Q66PY1 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.27■□□□□ 0.04
Scube3Q66PY1 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Scube3Q66PY1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Scube3Q66PY1 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms