Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC11.08□□□□□ -0.64
Zfp248Q640N4 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC11.07□□□□□ -0.64
Zfp248Q640N4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gm9726-201ENSMUST00000180321 678 ntBASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gm27628-201ENSMUST00000184911 107 ntBASIC11.07□□□□□ -0.64
Zfp248Q640N4 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gm9449-201ENSMUST00000207265 1011 ntBASIC11.07□□□□□ -0.64
Zfp248Q640N4 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Zfp248Q640N4 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Gm13464-201ENSMUST00000119418 935 ntBASIC11.06□□□□□ -0.64
Zfp248Q640N4 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Gm2272-201ENSMUST00000194903 582 ntBASIC11.06□□□□□ -0.64
Zfp248Q640N4 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Zfp248Q640N4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms