Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Gm8410-201ENSMUST00000117225 605 ntBASIC17.14■□□□□ 0.33
Ctr9Q62018 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC17.14■□□□□ 0.33
Ctr9Q62018 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
Ctr9Q62018 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Ctr9Q62018 Gm9182-201ENSMUST00000217829 639 ntBASIC17.14■□□□□ 0.33
Ctr9Q62018 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Ctr9Q62018 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
Ctr9Q62018 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ctr9Q62018 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm29310-201ENSMUST00000185468 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21825-201ENSMUST00000185728 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm29109-201ENSMUST00000185895 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21896-201ENSMUST00000186520 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21873-201ENSMUST00000186728 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21794-201ENSMUST00000187056 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21880-201ENSMUST00000187275 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21826-201ENSMUST00000187451 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21198-201ENSMUST00000188393 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21749-201ENSMUST00000189343 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21901-201ENSMUST00000189568 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm29424-201ENSMUST00000189716 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm28599-201ENSMUST00000189838 694 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21867-201ENSMUST00000189917 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm29269-201ENSMUST00000190087 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21722-201ENSMUST00000190153 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm28423-201ENSMUST00000190701 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21899-201ENSMUST00000190745 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21910-201ENSMUST00000191163 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21849-201ENSMUST00000191571 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm28678-201ENSMUST00000191593 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm20910-201ENSMUST00000193268 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm21871-201ENSMUST00000194621 696 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctr9Q62018 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm29340-201ENSMUST00000188763 3854 ntBASIC17.13■□□□□ 0.33
Ctr9Q62018 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ctr9Q62018 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctr9Q62018 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC17.12■□□□□ 0.33
Ctr9Q62018 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctr9Q62018 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC17.12■□□□□ 0.33
Ctr9Q62018 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Gm5566-201ENSMUST00000116118 459 ntBASIC17.12■□□□□ 0.33
Ctr9Q62018 Mir7023-201ENSMUST00000185093 64 ntBASIC17.12■□□□□ 0.33
Ctr9Q62018 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ctr9Q62018 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC17.12■□□□□ 0.33
Ctr9Q62018 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 AC159621.2-201ENSMUST00000223519 1326 ntBASIC17.12■□□□□ 0.33
Ctr9Q62018 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Carlr-201ENSMUST00000181515 2574 ntBASIC17.12■□□□□ 0.33
Ctr9Q62018 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ctr9Q62018 Gm5357-201ENSMUST00000212720 1924 ntBASIC17.11■□□□□ 0.33
Ctr9Q62018 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ctr9Q62018 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms