Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC19.22■□□□□ 0.67
Gli3Q61602 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.22■□□□□ 0.67
Gli3Q61602 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Gli3Q61602 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Gli3Q61602 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
Gli3Q61602 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC19.21■□□□□ 0.67
Gli3Q61602 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Gm13369-201ENSMUST00000119442 987 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 Gm12715-201ENSMUST00000121430 1128 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 AC153974.2-201ENSMUST00000218577 1025 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Gli3Q61602 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Gli3Q61602 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Gli3Q61602 Gm42471-201ENSMUST00000201457 1865 ntBASIC19.21■□□□□ 0.67
Gli3Q61602 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Gli3Q61602 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Gm9431-201ENSMUST00000119765 1051 ntBASIC19.2■□□□□ 0.66
Gli3Q61602 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Gm24420-201ENSMUST00000176676 59 ntBASIC19.2■□□□□ 0.66
Gli3Q61602 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Gli3Q61602 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.2■□□□□ 0.66
Gli3Q61602 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Gli3Q61602 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Gli3Q61602 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Mir6927-201ENSMUST00000184494 71 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 Gm37489-201ENSMUST00000191883 159 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 App-207ENSMUST00000227737 2827 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Gm21009-201ENSMUST00000197169 1669 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC19.19■□□□□ 0.66
Gli3Q61602 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Gm12134-201ENSMUST00000122109 520 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC19.19■□□□□ 0.66
Gli3Q61602 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Gm37922-201ENSMUST00000195596 455 ntBASIC19.19■□□□□ 0.66
Gli3Q61602 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC19.19■□□□□ 0.66
Gli3Q61602 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC19.19■□□□□ 0.66
Gli3Q61602 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Gli3Q61602 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Gli3Q61602 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Gm11557-201ENSMUST00000120200 1008 ntBASIC19.18■□□□□ 0.66
Gli3Q61602 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.18■□□□□ 0.66
Gli3Q61602 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
Gli3Q61602 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Gm8927-201ENSMUST00000181978 981 ntBASIC19.18■□□□□ 0.66
Gli3Q61602 AC073947.2-201ENSMUST00000215888 1130 ntBASIC19.18■□□□□ 0.66
Gli3Q61602 Gm10146-201ENSMUST00000072739 309 ntBASIC19.18■□□□□ 0.66
Gli3Q61602 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Gli3Q61602 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Gli3Q61602 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Gli3Q61602 AC168058.1-201ENSMUST00000219521 2282 ntBASIC19.17■□□□□ 0.66
Gli3Q61602 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms