Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccne1Q61457 Gm42632-201ENSMUST00000201707 2411 ntBASIC18.84■□□□□ 0.61
Ccne1Q61457 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Ccne1Q61457 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccne1Q61457 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Ccne1Q61457 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccne1Q61457 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ccne1Q61457 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ccne1Q61457 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.83■□□□□ 0.6
Ccne1Q61457 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.83■□□□□ 0.6
Ccne1Q61457 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccne1Q61457 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC18.83■□□□□ 0.6
Ccne1Q61457 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC18.83■□□□□ 0.6
Ccne1Q61457 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Ccne1Q61457 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ccne1Q61457 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ccne1Q61457 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccne1Q61457 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 AC153872.1-201ENSMUST00000199539 128 ntBASIC18.82■□□□□ 0.6
Ccne1Q61457 AC238811.3-201ENSMUST00000225422 709 ntBASIC18.82■□□□□ 0.6
Ccne1Q61457 AC159006.1-201ENSMUST00000226396 258 ntBASIC18.82■□□□□ 0.6
Ccne1Q61457 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ccne1Q61457 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ccne1Q61457 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
Ccne1Q61457 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccne1Q61457 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccne1Q61457 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.81■□□□□ 0.6
Ccne1Q61457 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC18.81■□□□□ 0.6
Ccne1Q61457 Gm25857-201ENSMUST00000082788 129 ntBASIC18.81■□□□□ 0.6
Ccne1Q61457 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC18.81■□□□□ 0.6
Ccne1Q61457 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ccne1Q61457 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccne1Q61457 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ccne1Q61457 Gm11918-201ENSMUST00000121660 179 ntBASIC18.8■□□□□ 0.6
Ccne1Q61457 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccne1Q61457 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccne1Q61457 Gm8602-201ENSMUST00000184045 607 ntBASIC18.8■□□□□ 0.6
Ccne1Q61457 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC18.8■□□□□ 0.6
Ccne1Q61457 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC18.8■□□□□ 0.6
Ccne1Q61457 AC155286.1-201ENSMUST00000218632 448 ntBASIC18.8■□□□□ 0.6
Ccne1Q61457 AC139580.1-202ENSMUST00000223574 928 ntBASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms