Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.2□□□□□ -0.14
Vsx2Q61412 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.2□□□□□ -0.14
Vsx2Q61412 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vsx2Q61412 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vsx2Q61412 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.19□□□□□ -0.14
Vsx2Q61412 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gm43767-201ENSMUST00000198933 381 ntBASIC14.19□□□□□ -0.14
Vsx2Q61412 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vsx2Q61412 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vsx2Q61412 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC14.19□□□□□ -0.14
Vsx2Q61412 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm23935-201ENSMUST00000102303 57 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm24270-201ENSMUST00000102326 57 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm11025-201ENSMUST00000140773 466 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Gm24245-201ENSMUST00000157318 57 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC14.18□□□□□ -0.14
Vsx2Q61412 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.18□□□□□ -0.14
Vsx2Q61412 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vsx2Q61412 AC124549.3-201ENSMUST00000225541 367 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 AC155252.2-201ENSMUST00000226946 680 ntBASIC14.18□□□□□ -0.14
Vsx2Q61412 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms