Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm7783-201ENSMUST00000204795 781 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm18056-201ENSMUST00000207670 568 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm18061-201ENSMUST00000208350 562 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm18063-201ENSMUST00000208529 568 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm18052-201ENSMUST00000208750 559 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC15.98■□□□□ 0.15
Col11a1Q61245 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.98■□□□□ 0.15
Col11a1Q61245 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col11a1Q61245 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col11a1Q61245 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.98■□□□□ 0.15
Col11a1Q61245 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Col11a1Q61245 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col11a1Q61245 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col11a1Q61245 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Col11a1Q61245 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Col11a1Q61245 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC15.97■□□□□ 0.15
Col11a1Q61245 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.97■□□□□ 0.15
Col11a1Q61245 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Col11a1Q61245 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm8213-201ENSMUST00000118191 441 ntBASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Col11a1Q61245 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Col11a1Q61245 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Col11a1Q61245 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC15.96■□□□□ 0.14
Col11a1Q61245 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm8927-201ENSMUST00000181978 981 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm27682-201ENSMUST00000183930 110 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm38266-201ENSMUST00000194931 421 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC15.96■□□□□ 0.14
Col11a1Q61245 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm3222-201ENSMUST00000071282 990 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a1Q61245 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
Col11a1Q61245 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Col11a1Q61245 Gm43352-201ENSMUST00000196419 3065 ntBASIC15.96■□□□□ 0.14
Col11a1Q61245 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Col11a1Q61245 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm27501-201ENSMUST00000183599 107 ntBASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm5069-202ENSMUST00000192714 1011 ntBASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm4857-201ENSMUST00000192718 785 ntBASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm45880-201ENSMUST00000213041 853 ntBASIC15.95■□□□□ 0.14
Col11a1Q61245 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm19309-201ENSMUST00000218295 205 ntBASIC15.95■□□□□ 0.14
Col11a1Q61245 Map3k3-201ENSMUST00000002044 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Col11a1Q61245 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 47.9 ms