Protein–RNA interactions for Protein: Q61216

Mre11, Double-strand break repair protein MRE11, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mre11Q61216 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Mre11Q61216 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mre11Q61216 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Mre11Q61216 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Mre11Q61216 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC17.43■□□□□ 0.38
Mre11Q61216 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Gm15358-201ENSMUST00000119249 520 ntBASIC17.43■□□□□ 0.38
Mre11Q61216 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Mre11Q61216 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Mre11Q61216 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC17.43■□□□□ 0.38
Mre11Q61216 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Mre11Q61216 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
Mre11Q61216 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.42■□□□□ 0.38
Mre11Q61216 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.42■□□□□ 0.38
Mre11Q61216 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Mre11Q61216 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.42■□□□□ 0.38
Mre11Q61216 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.42■□□□□ 0.38
Mre11Q61216 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Mre11Q61216 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Mre11Q61216 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 4930412F09Rik-201ENSMUST00000139006 1017 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.41■□□□□ 0.38
Mre11Q61216 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC17.41■□□□□ 0.38
Mre11Q61216 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.41■□□□□ 0.38
Mre11Q61216 AC093926.2-201ENSMUST00000214468 1228 ntBASIC17.41■□□□□ 0.38
Mre11Q61216 AC158982.1-201ENSMUST00000228377 901 ntBASIC17.41■□□□□ 0.38
Mre11Q61216 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Mre11Q61216 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Gm14371-201ENSMUST00000138925 1518 ntBASIC17.41■□□□□ 0.38
Mre11Q61216 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Mre11Q61216 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC17.4■□□□□ 0.38
Mre11Q61216 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Mre11Q61216 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms