Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
Col12a1Q60847 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Gm8213-201ENSMUST00000118191 441 ntBASIC14.1□□□□□ -0.15
Col12a1Q60847 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Col12a1Q60847 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm22334-201ENSMUST00000158070 133 ntBASIC14.09□□□□□ -0.15
Col12a1Q60847 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm10275-202ENSMUST00000168697 495 ntBASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm4819-201ENSMUST00000182170 1009 ntBASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.09□□□□□ -0.15
Col12a1Q60847 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm10275-201ENSMUST00000092620 635 ntBASIC14.09□□□□□ -0.15
Col12a1Q60847 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 2610027K06Rik-203ENSMUST00000140673 2076 ntTSL 5 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Col12a1Q60847 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Sh2d7-202ENSMUST00000118413 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Col12a1Q60847 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.08□□□□□ -0.15
Col12a1Q60847 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Col12a1Q60847 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.08□□□□□ -0.15
Col12a1Q60847 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.08□□□□□ -0.15
Col12a1Q60847 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Col12a1Q60847 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.08□□□□□ -0.16
Col12a1Q60847 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Gm6082-201ENSMUST00000215204 454 ntBASIC14.08□□□□□ -0.16
Col12a1Q60847 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Rnf7-201ENSMUST00000057500 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Col12a1Q60847 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.08□□□□□ -0.16
Col12a1Q60847 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Col12a1Q60847 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Gm16505-201ENSMUST00000179981 232 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Mir6979-201ENSMUST00000183927 56 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Col12a1Q60847 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Gm14381-201ENSMUST00000122105 414 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Gm27682-201ENSMUST00000183930 110 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Mir433-201ENSMUST00000093564 124 ntBASIC14.07□□□□□ -0.16
Col12a1Q60847 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Col12a1Q60847 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms