Protein–RNA interactions for Protein: Q5R1E6

Trav6-3, T cell receptor alpha variable 6-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-3Q5R1E6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Trav6-3Q5R1E6 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm13884-201ENSMUST00000118103 829 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Mir5126-201ENSMUST00000175513 77 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm28659-201ENSMUST00000188013 759 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Gm15590-201ENSMUST00000078419 552 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.68□□□□□ -0.54
Trav6-3Q5R1E6 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm27628-201ENSMUST00000184911 107 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm5864-201ENSMUST00000202263 970 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm10154-201ENSMUST00000084445 354 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm45546-201ENSMUST00000211053 2394 ntBASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav6-3Q5R1E6 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms