Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm43056-201ENSMUST00000197865 2791 ntBASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm18489-201ENSMUST00000172565 551 ntBASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trav15-1-dv6-1Q5R1D2 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms