Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vps13aQ5H8C4 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Gm38671-201ENSMUST00000200573 130 ntBASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 AC133598.1-201ENSMUST00000224327 660 ntBASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Cts7-204ENSMUST00000225321 1257 ntBASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Snora73a-201ENSMUST00000082453 205 ntBASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vps13aQ5H8C4 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Spata3-211ENSMUST00000159876 760 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm43133-201ENSMUST00000197472 463 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm44608-201ENSMUST00000206827 855 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm8227-201ENSMUST00000223306 571 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm13297-201ENSMUST00000120205 934 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm2639-201ENSMUST00000156881 1297 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 CT573034.1-201ENSMUST00000222983 313 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm11524-201ENSMUST00000119349 807 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm11803-201ENSMUST00000119966 444 ntBASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vps13aQ5H8C4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm13461-201ENSMUST00000120980 662 ntBASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm22334-201ENSMUST00000158070 133 ntBASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm37986-201ENSMUST00000193285 383 ntBASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Atraid-205ENSMUST00000201136 894 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Gm6334-201ENSMUST00000207083 228 ntBASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vps13aQ5H8C4 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Ccdc166-201ENSMUST00000182172 2584 ntBASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm1335-201ENSMUST00000121653 386 ntBASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm17376-201ENSMUST00000166016 84 ntBASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm18916-201ENSMUST00000198264 1246 ntBASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm7118-201ENSMUST00000200167 1003 ntBASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vps13aQ5H8C4 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms