Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Rc3h1Q4VGL6 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Gm14719-201ENSMUST00000121891 340 ntBASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Gm10275-202ENSMUST00000168697 495 ntBASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Wdyhv1-206ENSMUST00000227142 786 ntBASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Gm10275-201ENSMUST00000092620 635 ntBASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Gm45133-201ENSMUST00000207548 2773 ntBASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Rc3h1Q4VGL6 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Rc3h1Q4VGL6 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rc3h1Q4VGL6 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rc3h1Q4VGL6 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.77■□□□□ 0.27
Rc3h1Q4VGL6 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rc3h1Q4VGL6 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Rc3h1Q4VGL6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 AC132863.2-201ENSMUST00000226643 799 ntBASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 AC123645.1-201ENSMUST00000228469 605 ntBASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Rc3h1Q4VGL6 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Gm4204-201ENSMUST00000110798 1231 ntBASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Mir125a-201ENSMUST00000083545 68 ntBASIC16.75■□□□□ 0.27
Rc3h1Q4VGL6 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms