Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm6502-202ENSMUST00000097478 1218 ntTSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Rarb-207ENSMUST00000225921 2756 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 AC154849.4-201ENSMUST00000224868 365 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Drg1-201ENSMUST00000020741 1546 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 AC115863.1-201ENSMUST00000214815 1813 ntBASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC8.42□□□□□ -1.06
Herc2Q4U2R1 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm12485-201ENSMUST00000119641 291 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm23699-201ENSMUST00000158835 135 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Dmrt1i-203ENSMUST00000197311 718 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm44967-201ENSMUST00000207047 631 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Nudt2-201ENSMUST00000030154 845 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm6771-201ENSMUST00000182716 1001 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm17391-201ENSMUST00000171036 126 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Gm17330-201ENSMUST00000221047 165 ntBASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Herc2Q4U2R1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Gm5070-201ENSMUST00000177599 862 ntBASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 AC154222.2-201ENSMUST00000225848 607 ntBASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Herc2Q4U2R1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms