Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Gm18049-201ENSMUST00000208909 581 ntBASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Frmd5-207ENSMUST00000138157 4230 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Nlrc4Q3UP24 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Nlrc4Q3UP24 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm13823-201ENSMUST00000119930 345 ntBASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm23547-201ENSMUST00000158210 271 ntBASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm18766-201ENSMUST00000189811 808 ntBASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm4081-201ENSMUST00000195287 1838 ntBASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Nlrc4Q3UP24 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm6539-201ENSMUST00000119157 1064 ntBASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm13616-201ENSMUST00000120600 222 ntBASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm29310-201ENSMUST00000185468 696 ntBASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm21825-201ENSMUST00000185728 696 ntBASIC15.29■□□□□ 0.04
Nlrc4Q3UP24 Gm29109-201ENSMUST00000185895 696 ntBASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms