Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Gm43417-201ENSMUST00000201586 5207 ntBASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Gfm2-211ENSMUST00000161913 1829 ntTSL 2 BASIC10.47□□□□□ -0.73
Cks1brtQ3UNC9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm15378-201ENSMUST00000121894 207 ntBASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Timm23-208ENSMUST00000226683 750 ntBASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Cks1brtQ3UNC9 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Gm6198-201ENSMUST00000191337 2929 ntBASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC10.46□□□□□ -0.74
Cks1brtQ3UNC9 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Ssr1-204ENSMUST00000225319 1610 ntBASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Gm7556-201ENSMUST00000201178 1084 ntBASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC10.45□□□□□ -0.74
Cks1brtQ3UNC9 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC10.44□□□□□ -0.74
Cks1brtQ3UNC9 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC10.44□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms