Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Pspc1-202ENSMUST00000163924 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Spg11Q3UHA3 Gngt2-207ENSMUST00000107714 558 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm12203-201ENSMUST00000118235 598 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm12209-201ENSMUST00000120089 596 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm7046-201ENSMUST00000221351 977 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 AC140293.1-201ENSMUST00000225626 1247 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Gm26927-201ENSMUST00000182385 965 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 AC123645.1-201ENSMUST00000228469 605 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Pitpnm1-202ENSMUST00000100022 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.25□□□□□ -0.29
Spg11Q3UHA3 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Spg11Q3UHA3 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm25668-201ENSMUST00000157700 129 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm44397-201ENSMUST00000195950 113 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Mir686-201ENSMUST00000102174 109 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm14017-201ENSMUST00000121934 386 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Gm18893-201ENSMUST00000198416 943 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 AC115863.1-201ENSMUST00000214815 1813 ntBASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.24□□□□□ -0.29
Spg11Q3UHA3 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm13464-201ENSMUST00000119418 935 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm43094-201ENSMUST00000196549 921 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Gm10608-202ENSMUST00000213924 676 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Spg11Q3UHA3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms