Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Gm12260-201ENSMUST00000122447 411 ntBASIC13.7□□□□□ -0.22
Brf2Q3UAW9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Olfr286-202ENSMUST00000205305 969 ntBASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Gm9182-201ENSMUST00000217829 639 ntBASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Brf2Q3UAW9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gm9385-201ENSMUST00000117563 472 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gm17968-201ENSMUST00000194902 784 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gm18206-201ENSMUST00000207027 926 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Brf2Q3UAW9 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Mir8117-201ENSMUST00000184773 107 ntBASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.68□□□□□ -0.22
Brf2Q3UAW9 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Brf2Q3UAW9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms