Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm18195-201ENSMUST00000207604 706 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm10060-201ENSMUST00000212002 111 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm45293-201ENSMUST00000209754 1812 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Gm8242-201ENSMUST00000193029 1420 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Fndc4Q3TR08 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.42□□□□□ -0.42
Fndc4Q3TR08 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Gm15173-201ENSMUST00000122049 433 ntBASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Gm43364-201ENSMUST00000196046 3274 ntBASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Fndc4Q3TR08 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 AC157650.3-201ENSMUST00000225058 1476 ntBASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Gm7901-201ENSMUST00000120430 1597 ntBASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Fndc4Q3TR08 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.4□□□□□ -0.42
Fndc4Q3TR08 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fndc4Q3TR08 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fndc4Q3TR08 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Fndc4Q3TR08 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms