Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Gm3928-201ENSMUST00000121141 1307 ntBASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trim43aQ3TL54 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Gm13418-201ENSMUST00000119097 944 ntBASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC15.42■□□□□ 0.06
Trim43aQ3TL54 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.42■□□□□ 0.06
Trim43aQ3TL54 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44357-201ENSMUST00000195897 142 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm19658-201ENSMUST00000196231 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44367-201ENSMUST00000196836 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44350-201ENSMUST00000197197 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44390-201ENSMUST00000197533 144 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44313-201ENSMUST00000198018 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44486-201ENSMUST00000198508 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44314-201ENSMUST00000199263 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44394-201ENSMUST00000199558 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44484-201ENSMUST00000199873 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44466-201ENSMUST00000200264 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm44359-201ENSMUST00000200671 138 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 AC147366.1-201ENSMUST00000227671 852 ntBASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Trim43aQ3TL54 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
Trim43aQ3TL54 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.9 ms