Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Gm24526-201ENSMUST00000082921 158 ntBASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Tmem184b-201ENSMUST00000074991 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Gm6203-201ENSMUST00000209575 1342 ntBASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm1Q2TV84 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 G2e3-202ENSMUST00000119211 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm5687-201ENSMUST00000118252 640 ntBASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm26927-201ENSMUST00000182385 965 ntBASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm5069-202ENSMUST00000192714 1011 ntBASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Gm44985-201ENSMUST00000206202 1016 ntBASIC20.24■□□□□ 0.83
Trpm1Q2TV84 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm1Q2TV84 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Trpm1Q2TV84 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Trpm1Q2TV84 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Gm29199-201ENSMUST00000187766 775 ntBASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Gm45880-201ENSMUST00000213041 853 ntBASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Trpm1Q2TV84 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.2■□□□□ 0.83
Trpm1Q2TV84 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Trpm1Q2TV84 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Trpm1Q2TV84 Gm8706-201ENSMUST00000197372 1491 ntBASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms