Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Gm13884-201ENSMUST00000118103 829 ntBASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Gm7862-201ENSMUST00000121461 292 ntBASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Gm28659-201ENSMUST00000188013 759 ntBASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ptchd3Q0EEE2 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Gm11185-201ENSMUST00000117732 1007 ntBASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Gm10499-201ENSMUST00000174094 934 ntBASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ptchd3Q0EEE2 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.05□□□□□ -0.16
Ptchd3Q0EEE2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Ptchd3Q0EEE2 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms