Protein–RNA interactions for Protein: Q08624

Hoxc4, Homeobox protein Hox-C4, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc4Q08624 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Hoxc4Q08624 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm15460-201ENSMUST00000118147 391 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm20445-201ENSMUST00000061905 565 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm2423-201ENSMUST00000074863 733 ntBASIC13.93□□□□□ -0.18
Hoxc4Q08624 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Hoxc4Q08624 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.92□□□□□ -0.18
Hoxc4Q08624 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.92□□□□□ -0.18
Hoxc4Q08624 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.92□□□□□ -0.18
Hoxc4Q08624 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxc4Q08624 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Gm15393-201ENSMUST00000120499 219 ntBASIC13.91□□□□□ -0.18
Hoxc4Q08624 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxc4Q08624 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.91□□□□□ -0.18
Hoxc4Q08624 Gm44855-201ENSMUST00000205725 362 ntBASIC13.91□□□□□ -0.18
Hoxc4Q08624 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms