Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.77□□□□□ -0.37
Thbs3Q05895 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.77□□□□□ -0.37
Thbs3Q05895 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.77□□□□□ -0.37
Thbs3Q05895 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Thbs3Q05895 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Thbs3Q05895 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Mst1-201ENSMUST00000035211 2262 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm14822-201ENSMUST00000122247 291 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.76□□□□□ -0.37
Thbs3Q05895 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Thbs3Q05895 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Thbs3Q05895 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.75□□□□□ -0.37
Thbs3Q05895 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Gm18889-201ENSMUST00000174284 929 ntBASIC12.75□□□□□ -0.37
Thbs3Q05895 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Gm37736-201ENSMUST00000193564 2802 ntBASIC12.75□□□□□ -0.37
Thbs3Q05895 Gm38225-201ENSMUST00000194001 393 ntBASIC12.75□□□□□ -0.37
Thbs3Q05895 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Thbs3Q05895 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Slc39a11-201ENSMUST00000042657 2781 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Thbs3Q05895 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Thbs3Q05895 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms