Protein–RNA interactions for Protein: Q05793

Hspg2, Basement membrane-specific heparan sulfate proteoglycan core protein, mousemouse

Known RBP Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hspg2Q05793 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm24644-201ENSMUST00000157114 139 ntBASIC10.5□□□□□ -0.73
Hspg2Q05793 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC10.5□□□□□ -0.73
Hspg2Q05793 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Hspg2Q05793 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Igf1-206ENSMUST00000122100 651 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm26083-201ENSMUST00000157904 193 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm7553-201ENSMUST00000185805 1426 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm43822-201ENSMUST00000200285 476 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm9182-201ENSMUST00000217829 639 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Mir877-201ENSMUST00000104738 85 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm8749-201ENSMUST00000117737 331 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Gm38158-201ENSMUST00000194617 339 ntBASIC10.49□□□□□ -0.73
Hspg2Q05793 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Hspg2Q05793 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Hspg2Q05793 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm15376-201ENSMUST00000122258 783 ntBASIC10.48□□□□□ -0.73
Hspg2Q05793 Proscos-202ENSMUST00000178990 666 ntBASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm6283-201ENSMUST00000182369 1000 ntBASIC10.48□□□□□ -0.73
Hspg2Q05793 Ak6-205ENSMUST00000190729 1184 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm6013-201ENSMUST00000212264 699 ntBASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC10.48□□□□□ -0.73
Hspg2Q05793 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm15460-201ENSMUST00000118147 391 ntBASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Hspg2Q05793 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Hspg2Q05793 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Hspg2Q05793 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms