Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Gm43084-201ENSMUST00000200696 947 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 D9Wsu149-201ENSMUST00000214169 594 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 CT025642.1-201ENSMUST00000224734 1219 ntBASIC14.22□□□□□ -0.13
Col9a1Q05722 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.22□□□□□ -0.13
Col9a1Q05722 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col9a1Q05722 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Col9a1Q05722 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Col9a1Q05722 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm15635-204ENSMUST00000208024 2539 ntBASIC14.21□□□□□ -0.13
Col9a1Q05722 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm25951-201ENSMUST00000175330 64 ntBASIC14.21□□□□□ -0.13
Col9a1Q05722 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Gm14267-206ENSMUST00000226870 1209 ntBASIC14.21□□□□□ -0.13
Col9a1Q05722 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Col9a1Q05722 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.21□□□□□ -0.14
Col9a1Q05722 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Col9a1Q05722 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Col9a1Q05722 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.2□□□□□ -0.14
Col9a1Q05722 Gm16397-201ENSMUST00000122201 494 ntBASIC14.2□□□□□ -0.14
Col9a1Q05722 Gm29288-201ENSMUST00000191582 901 ntBASIC14.2□□□□□ -0.14
Col9a1Q05722 AC124457.1-201ENSMUST00000198845 120 ntBASIC14.2□□□□□ -0.14
Col9a1Q05722 Gm44772-201ENSMUST00000207623 1191 ntBASIC14.2□□□□□ -0.14
Col9a1Q05722 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Col9a1Q05722 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.2□□□□□ -0.14
Col9a1Q05722 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm22331-201ENSMUST00000158066 136 ntBASIC14.19□□□□□ -0.14
Col9a1Q05722 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm43133-201ENSMUST00000197472 463 ntBASIC14.19□□□□□ -0.14
Col9a1Q05722 Gm38671-201ENSMUST00000200573 130 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms