Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.39□□□□□ -0.43
Col8a1Q00780 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.39□□□□□ -0.43
Col8a1Q00780 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC12.39□□□□□ -0.43
Col8a1Q00780 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col8a1Q00780 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col8a1Q00780 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Hook2-201ENSMUST00000064495 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Col8a1Q00780 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a1Q00780 1700012C14Rik-201ENSMUST00000132023 498 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a1Q00780 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Gm3436-201ENSMUST00000179930 840 ntBASIC12.38□□□□□ -0.43
Col8a1Q00780 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.38□□□□□ -0.43
Col8a1Q00780 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.38□□□□□ -0.43
Col8a1Q00780 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col8a1Q00780 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.38□□□□□ -0.43
Col8a1Q00780 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Emx2-201ENSMUST00000062216 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC12.38□□□□□ -0.43
Col8a1Q00780 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Ifngr1-201ENSMUST00000020188 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col8a1Q00780 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC12.37□□□□□ -0.43
Col8a1Q00780 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Gm9002-201ENSMUST00000178437 499 ntBASIC12.37□□□□□ -0.43
Col8a1Q00780 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.37□□□□□ -0.43
Col8a1Q00780 Dupd1-202ENSMUST00000224735 548 ntBASIC12.37□□□□□ -0.43
Col8a1Q00780 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col8a1Q00780 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col8a1Q00780 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Col8a1Q00780 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Col8a1Q00780 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Col8a1Q00780 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Col8a1Q00780 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC12.36□□□□□ -0.43
Col8a1Q00780 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms