Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Npas1P97459 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.23□□□□□ -0.45
Npas1P97459 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC12.23□□□□□ -0.45
Npas1P97459 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Npas1P97459 Olfr129-201ENSMUST00000122318 993 ntBASIC12.23□□□□□ -0.45
Npas1P97459 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC12.23□□□□□ -0.45
Npas1P97459 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Npas1P97459 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Gm19164-201ENSMUST00000210667 640 ntBASIC12.23□□□□□ -0.45
Npas1P97459 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC12.23□□□□□ -0.45
Npas1P97459 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC12.23□□□□□ -0.45
Npas1P97459 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Npas1P97459 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Npas1P97459 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Gm2420-202ENSMUST00000202224 2249 ntBASIC12.22□□□□□ -0.45
Npas1P97459 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Npas1P97459 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC12.22□□□□□ -0.45
Npas1P97459 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC12.22□□□□□ -0.45
Npas1P97459 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Gm9172-201ENSMUST00000212092 954 ntBASIC12.22□□□□□ -0.45
Npas1P97459 Gm18622-201ENSMUST00000219361 595 ntBASIC12.22□□□□□ -0.45
Npas1P97459 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Npas1P97459 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.22□□□□□ -0.45
Npas1P97459 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
Npas1P97459 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
Npas1P97459 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Npas1P97459 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.21□□□□□ -0.45
Npas1P97459 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
Npas1P97459 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.21□□□□□ -0.45
Npas1P97459 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC12.21□□□□□ -0.45
Npas1P97459 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 Gm44454-201ENSMUST00000198541 138 ntBASIC12.21□□□□□ -0.45
Npas1P97459 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC12.21□□□□□ -0.45
Npas1P97459 AC158538.2-201ENSMUST00000225455 906 ntBASIC12.21□□□□□ -0.45
Npas1P97459 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Npas1P97459 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Npas1P97459 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Npas1P97459 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 30.7 ms