Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.98□□□□□ -0.01
Trim43bP86448 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Trim43bP86448 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC14.98□□□□□ -0.01
Trim43bP86448 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC14.98□□□□□ -0.01
Trim43bP86448 Gm9682-201ENSMUST00000197505 556 ntBASIC14.98□□□□□ -0.01
Trim43bP86448 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim43bP86448 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC14.98□□□□□ -0.01
Trim43bP86448 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Trim43bP86448 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Trim43bP86448 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
Trim43bP86448 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Trim43bP86448 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.98□□□□□ -0.01
Trim43bP86448 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.97□□□□□ -0.01
Trim43bP86448 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.97□□□□□ -0.01
Trim43bP86448 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.97□□□□□ -0.01
Trim43bP86448 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Trim43bP86448 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC14.97□□□□□ -0.01
Trim43bP86448 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.97□□□□□ -0.01
Trim43bP86448 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Gm5867-201ENSMUST00000063197 592 ntBASIC14.97□□□□□ -0.01
Trim43bP86448 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Trim43bP86448 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Trim43bP86448 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.96□□□□□ -0.01
Trim43bP86448 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim43bP86448 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.96□□□□□ -0.01
Trim43bP86448 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Trim43bP86448 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.96□□□□□ -0.01
Trim43bP86448 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Gm45167-201ENSMUST00000208007 322 ntBASIC14.96□□□□□ -0.01
Trim43bP86448 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC14.96□□□□□ -0.01
Trim43bP86448 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trim43bP86448 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.96□□□□□ -0.02
Trim43bP86448 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trim43bP86448 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms