Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcbP82349 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC12.97□□□□□ -0.33
SgcbP82349 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
SgcbP82349 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.97□□□□□ -0.33
SgcbP82349 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SgcbP82349 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SgcbP82349 Gm8749-201ENSMUST00000117737 331 ntBASIC12.97□□□□□ -0.33
SgcbP82349 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcbP82349 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.97□□□□□ -0.33
SgcbP82349 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.97□□□□□ -0.33
SgcbP82349 Gm7774-201ENSMUST00000200064 533 ntBASIC12.97□□□□□ -0.33
SgcbP82349 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.97□□□□□ -0.33
SgcbP82349 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
SgcbP82349 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.97□□□□□ -0.33
SgcbP82349 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SgcbP82349 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
SgcbP82349 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
SgcbP82349 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
SgcbP82349 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
SgcbP82349 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.96□□□□□ -0.33
SgcbP82349 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SgcbP82349 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC12.96□□□□□ -0.33
SgcbP82349 Gm25925-201ENSMUST00000158314 306 ntBASIC12.96□□□□□ -0.33
SgcbP82349 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC12.96□□□□□ -0.33
SgcbP82349 Ighv8-7-201ENSMUST00000194349 297 ntBASIC12.96□□□□□ -0.33
SgcbP82349 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SgcbP82349 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC12.96□□□□□ -0.33
SgcbP82349 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SgcbP82349 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SgcbP82349 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.34
SgcbP82349 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SgcbP82349 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Zfp1-201ENSMUST00000077791 1811 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 Gm25287-201ENSMUST00000103846 110 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Gm22918-201ENSMUST00000103855 110 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.95□□□□□ -0.34
SgcbP82349 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SgcbP82349 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.95□□□□□ -0.34
SgcbP82349 Gm9824-201ENSMUST00000178707 561 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.95□□□□□ -0.34
SgcbP82349 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.95□□□□□ -0.34
SgcbP82349 Gm10253-201ENSMUST00000194270 940 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Gm2451-201ENSMUST00000199447 999 ntBASIC12.95□□□□□ -0.34
SgcbP82349 Gm10290-201ENSMUST00000200451 999 ntBASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms