Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.62□□□□□ -0.23
Six5P70178 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.62□□□□□ -0.23
Six5P70178 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Six5P70178 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.62□□□□□ -0.23
Six5P70178 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Six5P70178 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.61□□□□□ -0.23
Six5P70178 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Gm2810-201ENSMUST00000118681 990 ntBASIC13.61□□□□□ -0.23
Six5P70178 Gm12134-201ENSMUST00000122109 520 ntBASIC13.61□□□□□ -0.23
Six5P70178 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.61□□□□□ -0.23
Six5P70178 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.61□□□□□ -0.23
Six5P70178 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.61□□□□□ -0.23
Six5P70178 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.61□□□□□ -0.23
Six5P70178 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Six5P70178 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.6□□□□□ -0.23
Six5P70178 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.6□□□□□ -0.23
Six5P70178 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.6□□□□□ -0.23
Six5P70178 Gm23547-201ENSMUST00000158210 271 ntBASIC13.6□□□□□ -0.23
Six5P70178 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC13.6□□□□□ -0.23
Six5P70178 Gm24513-201ENSMUST00000174964 138 ntBASIC13.6□□□□□ -0.23
Six5P70178 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.6□□□□□ -0.23
Six5P70178 Gm37230-201ENSMUST00000194491 818 ntBASIC13.6□□□□□ -0.23
Six5P70178 Gm2213-201ENSMUST00000197485 688 ntBASIC13.6□□□□□ -0.23
Six5P70178 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.6□□□□□ -0.23
Six5P70178 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Six5P70178 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.6□□□□□ -0.23
Six5P70178 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.6□□□□□ -0.23
Six5P70178 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Six5P70178 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Carlr-201ENSMUST00000181515 2574 ntBASIC13.6□□□□□ -0.23
Six5P70178 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Six5P70178 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Six5P70178 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.59□□□□□ -0.23
Six5P70178 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.59□□□□□ -0.23
Six5P70178 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Six5P70178 Gm11745-201ENSMUST00000121669 448 ntBASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms