Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Lhx1P63006 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC14.28□□□□□ -0.12
Lhx1P63006 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC14.28□□□□□ -0.12
Lhx1P63006 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.28□□□□□ -0.12
Lhx1P63006 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Gm10275-202ENSMUST00000168697 495 ntBASIC14.28□□□□□ -0.12
Lhx1P63006 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Lhx1P63006 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Gm10275-201ENSMUST00000092620 635 ntBASIC14.28□□□□□ -0.12
Lhx1P63006 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lhx1P63006 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Lhx1P63006 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Lhx1P63006 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.12
Lhx1P63006 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Lhx1P63006 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Lhx1P63006 Gm14767-201ENSMUST00000121559 586 ntBASIC14.27□□□□□ -0.13
Lhx1P63006 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Lhx1P63006 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lhx1P63006 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx1P63006 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Gm6888-201ENSMUST00000221983 706 ntBASIC14.27□□□□□ -0.13
Lhx1P63006 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.27□□□□□ -0.13
Lhx1P63006 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
Lhx1P63006 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lhx1P63006 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Lhx1P63006 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Camk2g-217ENSMUST00000226630 1937 ntBASIC14.27□□□□□ -0.13
Lhx1P63006 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Lhx1P63006 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.27□□□□□ -0.13
Lhx1P63006 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Lhx1P63006 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.26□□□□□ -0.13
Lhx1P63006 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC14.26□□□□□ -0.13
Lhx1P63006 Phf12-201ENSMUST00000049167 4410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm27533-201ENSMUST00000183800 152 ntBASIC14.26□□□□□ -0.13
Lhx1P63006 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.26□□□□□ -0.13
Lhx1P63006 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.26□□□□□ -0.13
Lhx1P63006 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Lhx1P63006 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Lhx1P63006 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms