Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.88□□□□□ -0.03
Ybx1P62960 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Ybx1P62960 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC14.87□□□□□ -0.03
Ybx1P62960 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ybx1P62960 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Ybx1P62960 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.87□□□□□ -0.03
Ybx1P62960 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Olfr286-202ENSMUST00000205305 969 ntBASIC14.87□□□□□ -0.03
Ybx1P62960 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.87□□□□□ -0.03
Ybx1P62960 AC153527.1-201ENSMUST00000220412 602 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Ybx1P62960 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC14.87□□□□□ -0.03
Ybx1P62960 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Gm11839-201ENSMUST00000120647 1953 ntBASIC14.87□□□□□ -0.03
Ybx1P62960 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Ybx1P62960 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.86□□□□□ -0.03
Ybx1P62960 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ybx1P62960 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Ybx1P62960 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Ybx1P62960 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Ybx1P62960 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Cdk7-205ENSMUST00000225990 1159 ntBASIC14.85□□□□□ -0.03
Ybx1P62960 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Gm15222-202ENSMUST00000228667 1726 ntBASIC14.85□□□□□ -0.03
Ybx1P62960 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Ybx1P62960 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Ybx1P62960 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 66.9 ms