Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Lsm3P62311 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.27□□□□□ -0.28
Lsm3P62311 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lsm3P62311 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lsm3P62311 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.28
Lsm3P62311 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Lsm3P62311 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Lsm3P62311 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Lsm3P62311 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC13.27□□□□□ -0.29
Lsm3P62311 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC13.27□□□□□ -0.29
Lsm3P62311 Gm27011-201ENSMUST00000182352 972 ntBASIC13.27□□□□□ -0.29
Lsm3P62311 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.27□□□□□ -0.29
Lsm3P62311 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC13.27□□□□□ -0.29
Lsm3P62311 AC164629.5-201ENSMUST00000220387 632 ntBASIC13.27□□□□□ -0.29
Lsm3P62311 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.27□□□□□ -0.29
Lsm3P62311 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.27□□□□□ -0.29
Lsm3P62311 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Lsm3P62311 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Lsm3P62311 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Lsm3P62311 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Lsm3P62311 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Mir5130-201ENSMUST00000175160 84 ntBASIC13.26□□□□□ -0.29
Lsm3P62311 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Lsm3P62311 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.26□□□□□ -0.29
Lsm3P62311 Gm30025-201ENSMUST00000218555 728 ntBASIC13.26□□□□□ -0.29
Lsm3P62311 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.26□□□□□ -0.29
Lsm3P62311 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.26□□□□□ -0.29
Lsm3P62311 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Lsm3P62311 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Lsm3P62311 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC13.25□□□□□ -0.29
Lsm3P62311 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lsm3P62311 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.25□□□□□ -0.29
Lsm3P62311 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lsm3P62311 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Lsm3P62311 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Lsm3P62311 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms