Protein–RNA interactions for Protein: P61079

Ube2d3, Ubiquitin-conjugating enzyme E2 D3, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube2d3P61079 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Ube2d3P61079 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC10.43□□□□□ -0.74
Ube2d3P61079 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ube2d3P61079 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC10.43□□□□□ -0.74
Ube2d3P61079 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Gm28182-201ENSMUST00000188354 2477 ntBASIC10.43□□□□□ -0.74
Ube2d3P61079 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC10.43□□□□□ -0.74
Ube2d3P61079 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Ube2d3P61079 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Best4-ps-201ENSMUST00000129783 1380 ntBASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC10.42□□□□□ -0.74
Ube2d3P61079 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Ube2d3P61079 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm43364-201ENSMUST00000196046 3274 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm42769-201ENSMUST00000198576 1659 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 AC130669.1-201ENSMUST00000228537 1672 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm7862-201ENSMUST00000121461 292 ntBASIC10.41□□□□□ -0.74
Ube2d3P61079 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC10.41□□□□□ -0.74
Ube2d3P61079 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Ube2d3P61079 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Ube2d3P61079 Gm45167-201ENSMUST00000208007 322 ntBASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms