Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Sf3b6P59708 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
Sf3b6P59708 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.35
Sf3b6P59708 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.9□□□□□ -0.35
Sf3b6P59708 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3b6P59708 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.35
Sf3b6P59708 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Sf3b6P59708 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Sf3b6P59708 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.9□□□□□ -0.35
Sf3b6P59708 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Sf3b6P59708 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.89□□□□□ -0.35
Sf3b6P59708 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Gm18489-201ENSMUST00000172565 551 ntBASIC12.89□□□□□ -0.35
Sf3b6P59708 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.89□□□□□ -0.35
Sf3b6P59708 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Sf3b6P59708 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Sf3b6P59708 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm11780-201ENSMUST00000136880 516 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm18195-201ENSMUST00000207604 706 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm6376-201ENSMUST00000209407 580 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3b6P59708 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.88□□□□□ -0.35
Sf3b6P59708 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Sf3b6P59708 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.88□□□□□ -0.35
Sf3b6P59708 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.87□□□□□ -0.35
Sf3b6P59708 AC122901.1-201ENSMUST00000214203 1790 ntBASIC12.87□□□□□ -0.35
Sf3b6P59708 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Sf3b6P59708 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.87□□□□□ -0.35
Sf3b6P59708 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms