Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nphp4P59240 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Nphp4P59240 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC19.52■□□□□ 0.72
Nphp4P59240 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Gm44645-201ENSMUST00000205492 1653 ntBASIC19.52■□□□□ 0.72
Nphp4P59240 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
Nphp4P59240 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Nphp4P59240 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nphp4P59240 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nphp4P59240 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nphp4P59240 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.52■□□□□ 0.71
Nphp4P59240 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
Nphp4P59240 AC115735.4-201ENSMUST00000227460 1944 ntBASIC19.51■□□□□ 0.71
Nphp4P59240 Gm11960-202ENSMUST00000181063 2858 ntBASIC19.51■□□□□ 0.71
Nphp4P59240 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.51■□□□□ 0.71
Nphp4P59240 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.51■□□□□ 0.71
Nphp4P59240 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Gm37728-201ENSMUST00000195025 2292 ntBASIC19.51■□□□□ 0.71
Nphp4P59240 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Nphp4P59240 Mir6392-201ENSMUST00000184924 108 ntBASIC19.51■□□□□ 0.71
Nphp4P59240 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC19.51■□□□□ 0.71
Nphp4P59240 AC154687.2-201ENSMUST00000223853 640 ntBASIC19.51■□□□□ 0.71
Nphp4P59240 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Nphp4P59240 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Gm6159-201ENSMUST00000191249 1724 ntBASIC19.5■□□□□ 0.71
Nphp4P59240 Gm38037-201ENSMUST00000192600 1624 ntBASIC19.5■□□□□ 0.71
Nphp4P59240 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Nphp4P59240 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
Nphp4P59240 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Nphp4P59240 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC19.5■□□□□ 0.71
Nphp4P59240 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
Nphp4P59240 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC19.5■□□□□ 0.71
Nphp4P59240 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC19.5■□□□□ 0.71
Nphp4P59240 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC19.5■□□□□ 0.71
Nphp4P59240 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Nphp4P59240 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
Nphp4P59240 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC19.49■□□□□ 0.71
Nphp4P59240 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nphp4P59240 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Gm13385-201ENSMUST00000121089 220 ntBASIC19.49■□□□□ 0.71
Nphp4P59240 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Nphp4P59240 Gm27701-201ENSMUST00000184498 110 ntBASIC19.49■□□□□ 0.71
Nphp4P59240 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC19.49■□□□□ 0.71
Nphp4P59240 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Gm4971-201ENSMUST00000205991 1108 ntBASIC19.49■□□□□ 0.71
Nphp4P59240 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Nphp4P59240 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Nphp4P59240 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Nphp4P59240 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC19.48■□□□□ 0.71
Nphp4P59240 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Nphp4P59240 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
Nphp4P59240 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC19.48■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms