Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 CT030657.3-201ENSMUST00000222707 1200 ntBASIC18.32■□□□□ 0.52
Msh6P54276 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Gm5763-201ENSMUST00000155951 1530 ntBASIC18.32■□□□□ 0.52
Msh6P54276 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Msh6P54276 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Msh6P54276 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Msh6P54276 Gm9768-201ENSMUST00000206007 2861 ntBASIC18.32■□□□□ 0.52
Msh6P54276 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC18.32■□□□□ 0.52
Msh6P54276 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Msh6P54276 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC18.31■□□□□ 0.52
Msh6P54276 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC18.31■□□□□ 0.52
Msh6P54276 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC18.31■□□□□ 0.52
Msh6P54276 Gm43630-201ENSMUST00000201550 776 ntBASIC18.31■□□□□ 0.52
Msh6P54276 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC18.31■□□□□ 0.52
Msh6P54276 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Msh6P54276 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.31■□□□□ 0.52
Msh6P54276 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.31■□□□□ 0.52
Msh6P54276 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Msh6P54276 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Msh6P54276 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Msh6P54276 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Mir1938-201ENSMUST00000158746 100 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 AA619741-201ENSMUST00000195095 646 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC18.3■□□□□ 0.52
Msh6P54276 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC18.3■□□□□ 0.52
Msh6P54276 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Gm16425-201ENSMUST00000118143 3130 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Msh6P54276 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Msh6P54276 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Msh6P54276 Gm15678-201ENSMUST00000117573 960 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Gm15824-201ENSMUST00000119516 955 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Gm9002-201ENSMUST00000178437 499 ntBASIC18.3■□□□□ 0.52
Msh6P54276 AC165157.4-201ENSMUST00000220587 139 ntBASIC18.3■□□□□ 0.52
Msh6P54276 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.3■□□□□ 0.52
Msh6P54276 AC121598.1-201ENSMUST00000228224 1019 ntBASIC18.3■□□□□ 0.52
Msh6P54276 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Msh6P54276 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Msh6P54276 Gm45212-201ENSMUST00000205831 3403 ntBASIC18.29■□□□□ 0.52
Msh6P54276 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC18.29■□□□□ 0.52
Msh6P54276 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
Msh6P54276 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Gm12960-201ENSMUST00000120017 1066 ntBASIC18.29■□□□□ 0.52
Msh6P54276 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Msh6P54276 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC18.29■□□□□ 0.52
Msh6P54276 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms