Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Atxn1P54254 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.44□□□□□ -0.1
Atxn1P54254 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Atxn1P54254 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC14.44□□□□□ -0.1
Atxn1P54254 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Gm20445-201ENSMUST00000061905 565 ntBASIC14.44□□□□□ -0.1
Atxn1P54254 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Atxn1P54254 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC14.44□□□□□ -0.1
Atxn1P54254 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Atxn1P54254 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Atxn1P54254 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Atxn1P54254 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Pdhb-201ENSMUST00000022268 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm11425-201ENSMUST00000119608 498 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Gm11918-201ENSMUST00000121660 179 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm27920-201ENSMUST00000183953 96 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Gm9396-201ENSMUST00000076703 567 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Gm7669-201ENSMUST00000210184 1603 ntBASIC14.43□□□□□ -0.1
Atxn1P54254 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
Atxn1P54254 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Atxn1P54254 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.43□□□□□ -0.1
Atxn1P54254 Cpxm1-201ENSMUST00000028897 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Atxn1P54254 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Atxn1P54254 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Gm24543-201ENSMUST00000103867 82 ntBASIC14.42□□□□□ -0.1
Atxn1P54254 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Atxn1P54254 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Atxn1P54254 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Atxn1P54254 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Gm37917-201ENSMUST00000194711 392 ntBASIC14.41□□□□□ -0.1
Atxn1P54254 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC14.41□□□□□ -0.1
Atxn1P54254 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.41□□□□□ -0.1
Atxn1P54254 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Shd-206ENSMUST00000225145 998 ntBASIC14.41□□□□□ -0.1
Atxn1P54254 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Atxn1P54254 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Atxn1P54254 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms