Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.02□□□□□ -0.17
Lbx1P52955 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Lbx1P52955 Pdlim7-206ENSMUST00000131306 1915 ntTSL 2 BASIC14.02□□□□□ -0.17
Lbx1P52955 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lbx1P52955 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Lbx1P52955 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC14.01□□□□□ -0.17
Lbx1P52955 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Gm15429-201ENSMUST00000151268 798 ntBASIC14.01□□□□□ -0.17
Lbx1P52955 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC14.01□□□□□ -0.17
Lbx1P52955 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Gm28760-202ENSMUST00000190376 481 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Gm42627-201ENSMUST00000197347 224 ntBASIC14.01□□□□□ -0.17
Lbx1P52955 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.01□□□□□ -0.17
Lbx1P52955 AC155258.1-201ENSMUST00000219303 253 ntBASIC14.01□□□□□ -0.17
Lbx1P52955 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 CT009718.3-201ENSMUST00000221116 367 ntBASIC14.01□□□□□ -0.17
Lbx1P52955 Abhd11os-203ENSMUST00000222613 363 ntBASIC14.01□□□□□ -0.17
Lbx1P52955 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Lbx1P52955 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Lbx1P52955 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Lbx1P52955 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Lbx1P52955 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC14□□□□□ -0.17
Lbx1P52955 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gm45212-201ENSMUST00000205831 3403 ntBASIC14□□□□□ -0.17
Lbx1P52955 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14□□□□□ -0.17
Lbx1P52955 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gm4819-201ENSMUST00000182170 1009 ntBASIC14□□□□□ -0.17
Lbx1P52955 Gm37008-201ENSMUST00000195712 319 ntBASIC14□□□□□ -0.17
Lbx1P52955 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14□□□□□ -0.17
Lbx1P52955 Gm9445-201ENSMUST00000207454 1285 ntBASIC14□□□□□ -0.17
Lbx1P52955 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14□□□□□ -0.17
Lbx1P52955 CT030182.1-201ENSMUST00000225935 533 ntBASIC14□□□□□ -0.17
Lbx1P52955 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC14□□□□□ -0.17
Lbx1P52955 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Cnbp-203ENSMUST00000113619 1661 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Gm14452-201ENSMUST00000118680 1632 ntBASIC14□□□□□ -0.17
Lbx1P52955 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Lbx1P52955 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Lbx1P52955 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC13.99□□□□□ -0.17
Lbx1P52955 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Lbx1P52955 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms