Protein–RNA interactions for Protein: P52194

Clgn, Calmegin, mousemouse

Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClgnP52194 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
ClgnP52194 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.84□□□□□ -0.03
ClgnP52194 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.84□□□□□ -0.03
ClgnP52194 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClgnP52194 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClgnP52194 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
ClgnP52194 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
ClgnP52194 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
ClgnP52194 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
ClgnP52194 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClgnP52194 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClgnP52194 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
ClgnP52194 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.83□□□□□ -0.04
ClgnP52194 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ClgnP52194 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ClgnP52194 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
ClgnP52194 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.83□□□□□ -0.04
ClgnP52194 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC14.83□□□□□ -0.04
ClgnP52194 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
ClgnP52194 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.83□□□□□ -0.04
ClgnP52194 Mir8117-201ENSMUST00000184773 107 ntBASIC14.83□□□□□ -0.04
ClgnP52194 Gm45683-201ENSMUST00000210825 1247 ntBASIC14.83□□□□□ -0.04
ClgnP52194 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.83□□□□□ -0.04
ClgnP52194 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.83□□□□□ -0.04
ClgnP52194 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
ClgnP52194 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
ClgnP52194 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
ClgnP52194 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
ClgnP52194 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Gm9727-201ENSMUST00000161387 555 ntBASIC14.82□□□□□ -0.04
ClgnP52194 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.82□□□□□ -0.04
ClgnP52194 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.82□□□□□ -0.04
ClgnP52194 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
ClgnP52194 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.82□□□□□ -0.04
ClgnP52194 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
ClgnP52194 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClgnP52194 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClgnP52194 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
ClgnP52194 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms