Protein–RNA interactions for Protein: P51612

Xpc, DNA repair protein complementing XP-C cells homolog, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XpcP51612 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
XpcP51612 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
XpcP51612 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
XpcP51612 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
XpcP51612 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
XpcP51612 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC17.68■□□□□ 0.42
XpcP51612 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Mir1247-201ENSMUST00000116706 82 ntBASIC17.68■□□□□ 0.42
XpcP51612 Gm5303-201ENSMUST00000117943 1252 ntBASIC17.68■□□□□ 0.42
XpcP51612 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC17.68■□□□□ 0.42
XpcP51612 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC17.68■□□□□ 0.42
XpcP51612 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC17.68■□□□□ 0.42
XpcP51612 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC17.68■□□□□ 0.42
XpcP51612 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
XpcP51612 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
XpcP51612 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Nfe2-207ENSMUST00000134554 1761 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
XpcP51612 Tcf21-202ENSMUST00000218002 1788 ntBASIC17.68■□□□□ 0.42
XpcP51612 Slc43a3-201ENSMUST00000090726 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
XpcP51612 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.67■□□□□ 0.42
XpcP51612 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC17.67■□□□□ 0.42
XpcP51612 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
XpcP51612 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
XpcP51612 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Tex264-201ENSMUST00000046735 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
XpcP51612 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC17.66■□□□□ 0.42
XpcP51612 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC17.66■□□□□ 0.42
XpcP51612 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
XpcP51612 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC17.66■□□□□ 0.42
XpcP51612 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC17.66■□□□□ 0.42
XpcP51612 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC17.66■□□□□ 0.42
XpcP51612 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 AC165157.4-201ENSMUST00000220587 139 ntBASIC17.66■□□□□ 0.42
XpcP51612 Gm19220-201ENSMUST00000222682 803 ntBASIC17.66■□□□□ 0.42
XpcP51612 AC238811.3-201ENSMUST00000225422 709 ntBASIC17.66■□□□□ 0.42
XpcP51612 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC17.66■□□□□ 0.42
XpcP51612 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
XpcP51612 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC17.66■□□□□ 0.42
XpcP51612 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.65■□□□□ 0.42
XpcP51612 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
XpcP51612 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
XpcP51612 Ldha-ps-201ENSMUST00000119390 995 ntBASIC17.65■□□□□ 0.42
XpcP51612 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC17.65■□□□□ 0.42
XpcP51612 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
XpcP51612 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC17.65■□□□□ 0.42
XpcP51612 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.65■□□□□ 0.42
XpcP51612 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
XpcP51612 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.65■□□□□ 0.42
XpcP51612 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms