Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.26■□□□□ 0.03
Rfx2P48379 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Rfx2P48379 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Rfx2P48379 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Rfx2P48379 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfx2P48379 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
Rfx2P48379 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC15.25■□□□□ 0.03
Rfx2P48379 Gm20949-201ENSMUST00000206478 952 ntBASIC15.25■□□□□ 0.03
Rfx2P48379 Gm5779-201ENSMUST00000218467 910 ntBASIC15.25■□□□□ 0.03
Rfx2P48379 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC15.25■□□□□ 0.03
Rfx2P48379 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.25■□□□□ 0.03
Rfx2P48379 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Rfx2P48379 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Rfx2P48379 Armc9-205ENSMUST00000131412 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Rfx2P48379 AC131743.5-201ENSMUST00000220775 1618 ntBASIC15.25■□□□□ 0.03
Rfx2P48379 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.24■□□□□ 0.03
Rfx2P48379 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Rfx2P48379 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC15.24■□□□□ 0.03
Rfx2P48379 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Gm43767-201ENSMUST00000198933 381 ntBASIC15.24■□□□□ 0.03
Rfx2P48379 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC15.24■□□□□ 0.03
Rfx2P48379 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Rfx2P48379 Gm43205-201ENSMUST00000198622 1968 ntBASIC15.24■□□□□ 0.03
Rfx2P48379 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Rfx2P48379 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rfx2P48379 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 AC159621.2-201ENSMUST00000223519 1326 ntBASIC15.23■□□□□ 0.03
Rfx2P48379 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfx2P48379 Gm13517-201ENSMUST00000120782 1495 ntBASIC15.23■□□□□ 0.03
Rfx2P48379 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Gm15693-201ENSMUST00000120470 637 ntBASIC15.23■□□□□ 0.03
Rfx2P48379 AC126408.1-201ENSMUST00000225184 523 ntBASIC15.23■□□□□ 0.03
Rfx2P48379 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC15.23■□□□□ 0.03
Rfx2P48379 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
Rfx2P48379 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC15.23■□□□□ 0.03
Rfx2P48379 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Rfx2P48379 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms