Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Xcl1P47993 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Xcl1P47993 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC9.44□□□□□ -0.9
Xcl1P47993 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC9.44□□□□□ -0.9
Xcl1P47993 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Xcl1P47993 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Xcl1P47993 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Xcl1P47993 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Xcl1P47993 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC9.43□□□□□ -0.9
Xcl1P47993 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Xcl1P47993 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Xcl1P47993 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC9.43□□□□□ -0.9
Xcl1P47993 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC9.43□□□□□ -0.9
Xcl1P47993 Gm7556-201ENSMUST00000201178 1084 ntBASIC9.43□□□□□ -0.9
Xcl1P47993 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC9.43□□□□□ -0.9
Xcl1P47993 AC127302.2-201ENSMUST00000215212 268 ntBASIC9.43□□□□□ -0.9
Xcl1P47993 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gm6139-201ENSMUST00000079261 882 ntBASIC9.43□□□□□ -0.9
Xcl1P47993 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Spag16-201ENSMUST00000065425 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Xcl1P47993 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Ptpn11-201ENSMUST00000054547 5535 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 AC126250.1-201ENSMUST00000228343 1768 ntBASIC9.42□□□□□ -0.9
Xcl1P47993 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Mmp14-206ENSMUST00000225641 3238 ntBASIC9.42□□□□□ -0.9
Xcl1P47993 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC9.42□□□□□ -0.9
Xcl1P47993 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC9.42□□□□□ -0.9
Xcl1P47993 Gm7638-201ENSMUST00000121348 967 ntBASIC9.42□□□□□ -0.9
Xcl1P47993 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Xcl1P47993 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC9.42□□□□□ -0.9
Xcl1P47993 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms