Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Sox18P43680 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.94□□□□□ -0.18
Sox18P43680 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Sox18P43680 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Sox18P43680 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Sox18P43680 Rcor1-202ENSMUST00000116388 2720 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Hist3h2a-201ENSMUST00000108817 2146 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox18P43680 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Sox18P43680 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sox18P43680 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Sox18P43680 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC13.93□□□□□ -0.18
Sox18P43680 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Sox18P43680 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Sox18P43680 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.93□□□□□ -0.18
Sox18P43680 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.93□□□□□ -0.18
Sox18P43680 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Sox18P43680 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.93□□□□□ -0.18
Sox18P43680 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Sox18P43680 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Sox18P43680 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
Sox18P43680 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Gm27528-202ENSMUST00000222916 2012 ntBASIC13.92□□□□□ -0.18
Sox18P43680 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Mir1247-201ENSMUST00000116706 82 ntBASIC13.92□□□□□ -0.18
Sox18P43680 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.92□□□□□ -0.18
Sox18P43680 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.92□□□□□ -0.18
Sox18P43680 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.92□□□□□ -0.18
Sox18P43680 Gm28745-201ENSMUST00000190069 305 ntBASIC13.92□□□□□ -0.18
Sox18P43680 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.92□□□□□ -0.18
Sox18P43680 Gm31409-201ENSMUST00000209894 710 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Sox18P43680 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Esr1-202ENSMUST00000105588 2733 ntTSL 5 BASIC13.92□□□□□ -0.18
Sox18P43680 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms