Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Mir686-201ENSMUST00000102174 109 ntBASIC15.19■□□□□ 0.02
HttP42859 Platr29-201ENSMUST00000130022 830 ntTSL 5 BASIC15.19■□□□□ 0.02
HttP42859 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
HttP42859 Gm45186-201ENSMUST00000206874 478 ntBASIC15.19■□□□□ 0.02
HttP42859 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HttP42859 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC15.18■□□□□ 0.02
HttP42859 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Gm43072-201ENSMUST00000200283 1671 ntBASIC15.18■□□□□ 0.02
HttP42859 Gm5049-201ENSMUST00000195878 1590 ntBASIC15.18■□□□□ 0.02
HttP42859 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC15.18■□□□□ 0.02
HttP42859 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 AC155237.1-201ENSMUST00000226196 1279 ntBASIC15.18■□□□□ 0.02
HttP42859 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
HttP42859 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.18■□□□□ 0.02
HttP42859 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC15.18■□□□□ 0.02
HttP42859 Gm7046-201ENSMUST00000221351 977 ntBASIC15.18■□□□□ 0.02
HttP42859 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.18■□□□□ 0.02
HttP42859 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
HttP42859 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Gm25927-201ENSMUST00000175058 117 ntBASIC15.17■□□□□ 0.02
HttP42859 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Gm45760-201ENSMUST00000212190 1782 ntBASIC15.17■□□□□ 0.02
HttP42859 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 n-R5s14-201ENSMUST00000122688 107 ntBASIC15.17■□□□□ 0.02
HttP42859 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
HttP42859 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
HttP42859 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Gm12485-201ENSMUST00000119641 291 ntBASIC15.16■□□□□ 0.02
HttP42859 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
HttP42859 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.16■□□□□ 0.02
HttP42859 Gm42929-201ENSMUST00000198374 1286 ntBASIC15.16■□□□□ 0.02
HttP42859 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
HttP42859 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
HttP42859 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.16■□□□□ 0.02
HttP42859 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Tmem40-205ENSMUST00000166254 811 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.15■□□□□ 0.02
HttP42859 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.15■□□□□ 0.02
HttP42859 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
HttP42859 Cdk2-201ENSMUST00000026415 2240 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
HttP42859 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms